Sequence

CL9.Contig3_DHA_Bulb

Expression profile

RPKM ( Reads Per Kilobase of exon per Million mapped reads )

Reference Bulb Root Leaf Stem
DHA_Bulb F1 A.roylei DHA F1 A.roylei DHC DHA F1 A.roylei FF FF+5A
3.28 2.45 0.00 1.22 0.30 0.15 3.06 3.14 2.55 0.46 0.64 0.45

Chromosome addition lines
FF1A FF2A FF3A FF4A FF5A FF6A FF7A FF8A AA FF
Bulb 2.96 4.7 3.69 3.48 4.22 2.62 6.98 2.82 7.54 2.44
Root 0.42 0.07 0.03 0.04 0.11 0.03 0.31 0.03 2.03 0.02
Leaf 1.36 1.27 1.7 2.49 1.31 2.46 2.44 2.69 4.04 1.56
DHA_Fusarium
Control TA AC76
average SD average SD average SD
2.80 0.38 2.83 0.78 3.31 1.65

BLAST

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
TAIR --No_Hits--
IRGSP --No_Hits--
nr --No_Hits--

Corresponding unigene

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
DHC_Leaf Unigene29791_DHC_Leaf 80.3 80.3 91.7 2e-18 size 754
DHA_Leaf Unigene26168_DHA_Leaf 100.0 100.0 184 2e-46 size 236
F1_Leaf CL7156.Contig1_F1_Leaf 100.0 100.0 391 1e-108 size 227
A.roylei_Leaf Unigene661_A.roylei_Leaf 94.1 94.1 103 4e-22 size 567
F1_Bulb Unigene26129_F1_Bulb 80.3 80.3 99.6 8e-21 size 827
A.roylei_Bulb Unigene41202_A.roylei_Bulb 81.5 81.5 115 1e-25 size 258
DHA_Root CL5801.Contig2_DHA_Root 85.9 85.9 95.6 1e-19 size 426
F1_Root Unigene22024_F1_Root 85.5 85.5 89.7 8e-18 size 522
A.roylei_Root CL7508.Contig1_A.roylei_Root 84.2 84.2 87.7 3e-17 size 467
FFStem Unigene28570_FFStem 91.3 91.3 89.7 8e-18 size 213
FF_5AStem CL3185.Contig6_FF_5AStem 91.0 91.0 113 5e-25 size 747
GI_kazusaEST CF434469 88.1 88.1 87.7 1e-17 UniRef100_Q1GWA8 Cluster: Pyruvate kinase precursor; n=1; Sphingopyxis alaskensis|Rep: Pyruvate kinase precursor -, partial (2%)
A.fistulosum_Unigene AFU_09465 91.8 91.8 97.6 8e-20


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