Sequence

CL9.Contig1_DHA_Bulb

Expression profile

RPKM ( Reads Per Kilobase of exon per Million mapped reads )

Reference Bulb Root Leaf Stem
DHA_Bulb F1 A.roylei DHA F1 A.roylei DHC DHA F1 A.roylei FF FF+5A
5.28 5.18 0.00 4.27 4.41 0.00 4.50 5.73 3.29 0.00 0.24 1.56

FF1A FF2A FF3A FF4A FF5A FF6A FF7A FF8A AA FF
Bulb 0.56 1.71 0.73 0.97 4.47 1.35 1.43 0.84 5.49 1.08
Root 0.04 0.16 0.15 0.13 1.21 0.05 0.11 0.04 2.04 0.16
Leaf 0.28 0.39 0.69 1.13 2.88 1.53 0.76 0.34 1.66 1.42

BLAST

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
TAIR --No_Hits--
IRGSP --No_Hits--
nr --No_Hits--


Corresponding unigene

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
DHC_Leaf CL3959.Contig3_DHC_Leaf 100.0 100.0 242 5e-64 size 513
DHA_Leaf CL4730.Contig2_DHA_Leaf 100.0 100.0 349 3e-96 size 461
F1_Leaf Unigene33431_F1_Leaf 100.0 100.0 349 3e-96 size 185
A.roylei_Leaf Unigene24571_A.roylei_Leaf 90.5 90.5 103 3e-22 size 169
F1_Bulb CL6948.Contig1_F1_Bulb 100.0 100.0 349 4e-96 size 203
A.roylei_Bulb CL7797.Contig4_A.roylei_Bulb 82.9 82.9 99.6 5e-21 size 318
DHA_Root Unigene34333_DHA_Root 100.0 100.0 323 2e-88 size 190
F1_Root Unigene22024_F1_Root 100.0 100.0 349 3e-96 size 522
A.roylei_Root CL83.Contig1_A.roylei_Root 83.1 83.1 107 2e-23 size 754
FFStem Unigene682_FFStem 87.0 87.0 95.6 8e-20 size 338
FF_5AStem CL3185.Contig8_FF_5AStem 85.8 85.8 145 1e-34 size 964
GI_kazusaEST --No_Hits--
A.fistulosum_Unigene AFU_19683 86.3 86.3 137 6e-32


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