Sequence

CL8.Contig3_DHA_Bulb

Expression profile

RPKM ( Reads Per Kilobase of exon per Million mapped reads )

Reference Bulb Root Leaf Stem
DHA_Bulb F1 A.roylei DHA F1 A.roylei DHC DHA F1 A.roylei FF FF+5A
4.67 12.13 2.29 6.85 7.17 1.15 5.72 2.02 3.58 2.08 4.34 3.40

Chromosome addition lines
FF1A FF2A FF3A FF4A FF5A FF6A FF7A FF8A AA FF
Bulb 3.69 2.6 5.32 3.95 6.08 5.27 5.92 4.26 3.47 3.96
Root 0.76 1.35 1.71 0.92 1.54 1.56 0.84 1.11 0.95 0.95
Leaf 1.75 2.31 2.23 2.7 1.12 2.39 3.19 2.73 0.68 2.51
DHA_Fusarium
Control TA AC76
average SD average SD average SD
7.42 1.42 6.25 1.42 6.57 0.67

BLAST

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
TAIR --No_Hits--
IRGSP --No_Hits--
nr --No_Hits--

Corresponding unigene

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
DHC_Leaf CL1165.Contig1_DHC_Leaf 100.0 100.0 343 2e-94 size 232
DHA_Leaf CL2084.Contig2_DHA_Leaf 100.0 100.0 339 3e-93 size 171
F1_Leaf CL5258.Contig2_F1_Leaf 91.9 91.9 224 1e-58 size 340
A.roylei_Leaf Unigene31088_A.roylei_Leaf 96.9 96.9 266 3e-71 size 198
F1_Bulb CL3596.Contig1_F1_Bulb 100.0 100.0 246 4e-65 size 306
A.roylei_Bulb Unigene8253_A.roylei_Bulb 96.3 96.3 262 6e-70 size 199
DHA_Root CL5136.Contig1_DHA_Root 100.0 100.0 343 2e-94 size 324
F1_Root CL2060.Contig1_F1_Root 100.0 100.0 339 3e-93 size 218
A.roylei_Root --No_Hits--
FFStem Unigene14246_FFStem 95.2 95.2 256 4e-68 size 213
FF_5AStem Unigene26141_FF_5AStem 95.2 95.2 256 4e-68 size 217
GI_kazusaEST --No_Hits--
A.fistulosum_Unigene AFU_98103 94.5 94.5 254 4e-67


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