Sequence

CL8.Contig2_DHA_Bulb

Expression profile

RPKM ( Reads Per Kilobase of exon per Million mapped reads )

Reference Bulb Root Leaf Stem
DHA_Bulb F1 A.roylei DHA F1 A.roylei DHC DHA F1 A.roylei FF FF+5A
4.96 5.06 0.40 3.86 1.75 0.40 3.08 1.55 3.21 0.50 0.63 0.59

Chromosome addition lines
FF1A FF2A FF3A FF4A FF5A FF6A FF7A FF8A AA FF
Bulb 0.13 0.12 0.12 0.05 0.48 0.49 1.22 0 3.46 0.25
Root 0.3 0.24 0.4 0.3 0.39 0.46 0.89 0.22 2.32 0.32
Leaf 0.06 0.06 0.06 0 0 0.13 0.71 0.08 0.86 0.08
DHA_Fusarium
Control TA AC76
average SD average SD average SD
2.88 0.77 2.98 0.47 3.13 0.67

BLAST

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
TAIR --No_Hits--
IRGSP --No_Hits--
nr --No_Hits--

Corresponding unigene

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
DHC_Leaf CL1165.Contig2_DHC_Leaf 100.0 100.0 355 1e-97 size 179
DHA_Leaf CL2084.Contig1_DHA_Leaf 100.0 100.0 319 7e-87 size 161
F1_Leaf CL5258.Contig2_F1_Leaf 99.7 99.7 666 0.0 size 340
A.roylei_Leaf Unigene31088_A.roylei_Leaf 93.9 93.9 272 1e-72 size 198
F1_Bulb CL3596.Contig2_F1_Bulb 99.0 99.0 371 1e-102 size 196
A.roylei_Bulb Unigene8253_A.roylei_Bulb 93.6 93.6 254 4e-67 size 199
DHA_Root CL5136.Contig1_DHA_Root 89.7 89.7 343 5e-94 size 324
F1_Root CL2060.Contig2_F1_Root 100.0 100.0 315 1e-85 size 159
A.roylei_Root --No_Hits--
FFStem Unigene14246_FFStem 92.8 92.8 295 1e-79 size 213
FF_5AStem Unigene26141_FF_5AStem 92.9 92.9 301 2e-81 size 217
GI_kazusaEST --No_Hits--
A.fistulosum_Unigene AFU_51662 89.5 89.5 387 1e-107


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