Length: 347 (bp)
RPKM (DHA_bulb): 4.54
Reference | Bulb | Root | Leaf | Stem | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
DHA_Bulb | F1 | A.roylei | DHA | F1 | A.roylei | DHC | DHA | F1 | A.roylei | FF | FF+5A |
4.54 | 6.62 | 0.00 | 37.59 | 13.75 | 3.55 | 3.31 | 1.56 | 1.91 | 0.00 | 1.68 | 0.23 |
chromosome addition lines
FF1A | FF2A | FF3A | FF4A | FF5A | FF6A | FF7A | FF8A | AA | FF | |
---|---|---|---|---|---|---|---|---|---|---|
Bulb | 0.43 | 1.02 | 1.81 | 0.37 | 0.73 | 1.21 | 0.57 | 0.48 | 4.31 | 0.16 |
Root | 3.89 | 6.92 | 31.88 | 3.23 | 4.82 | 4.1 | 1.84 | 7.43 | 35.8 | 1.33 |
Leaf | 0.8 | 1.51 | 1.8 | 1.42 | 0.62 | 0.99 | 0.82 | 0.75 | 0.84 | 0.98 |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
TAIR | AT4G27890.1 | 61.9 | 78.1 | 144 | 1e-35 | | Symbols: | HSP20-like chaperones superfamily protein | chr4:13886033-13887220 FORWARD LENGTH=293 |
IRGSP | Os06t0231300-01 | 69.1 | 83.5 | 153 | 3e-38 | CS domain domain containing protein. |
nr | gb|EOY23533.1| | 65.4 | 82.2 | 155 | 4e-36 | HSP20-like chaperones superfamily protein isoform 2 [Theobroma cacao] |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
DHC_Leaf | Unigene14849_DHC_Leaf | 100.0 | 100.0 | 428 | 1e-120 | size 430 |
DHA_Leaf | CL4603.Contig2_DHA_Leaf | 100.0 | 100.0 | 513 | 1e-145 | size 388 |
F1_Leaf | CL1869.Contig5_F1_Leaf | 100.0 | 100.0 | 315 | 1e-85 | size 159 |
A.roylei_Leaf | Unigene25722_A.roylei_Leaf | 79.2 | 79.2 | 91.7 | 2e-18 | size 1169 |
F1_Bulb | Unigene15750_F1_Bulb | 99.7 | 99.7 | 646 | 0.0 | size 442 |
A.roylei_Bulb | Unigene28668_A.roylei_Bulb | 79.2 | 79.2 | 91.7 | 3e-18 | size 1177 |
DHA_Root | CL385.Contig4_DHA_Root | 99.4 | 99.4 | 672 | 0.0 | size 712 |
F1_Root | CL1939.Contig2_F1_Root | 100.0 | 100.0 | 688 | 0.0 | size 714 |
A.roylei_Root | CL4950.Contig1_A.roylei_Root | 95.2 | 95.2 | 400 | 1e-111 | size 374 |
FFStem | Unigene23324_FFStem | 78.8 | 78.8 | 83.8 | 7e-16 | size 1211 |
FF_5AStem | Unigene13809_FF_5AStem | 78.8 | 78.8 | 83.8 | 7e-16 | size 1156 |
GI_kazusaEST | CF436182 | 84.6 | 84.6 | 69.9 | 3e-12 | similar to UniRef100_A9RZW7 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (14%) |
A.fistulosum_Unigene | AFU_08133 | 78.8 | 78.8 | 83.8 | 2e-15 |