Length: 1,136 (bp)
RPKM (DHA_bulb): 49.19
Reference | Bulb | Root | Leaf | Stem | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
DHA_Bulb | F1 | A.roylei | DHA | F1 | A.roylei | DHC | DHA | F1 | A.roylei | FF | FF+5A |
49.19 | 41.66 | 43.73 | 51.42 | 53.39 | 41.82 | 24.75 | 38.04 | 34.83 | 20.88 | 39.43 | 19.95 |
chromosome addition lines
FF1A | FF2A | FF3A | FF4A | FF5A | FF6A | FF7A | FF8A | AA | FF | |
---|---|---|---|---|---|---|---|---|---|---|
Bulb | 26.6 | 24.5 | 37.98 | 32.32 | 28.46 | 34.52 | 34.35 | 32.36 | 37.87 | 29.82 |
Root | 20.11 | 23.99 | 31.77 | 21.32 | 18.5 | 18.85 | 20.06 | 18.82 | 35.37 | 24.4 |
Leaf | 5.34 | 8.55 | 12.45 | 11.18 | 11.35 | 15 | 13.33 | 6.57 | 28.33 | 9.51 |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
TAIR | AT5G53400.1 | 63.7 | 74.5 | 278 | 4e-75 | | Symbols: BOB1 | HSP20-like chaperones superfamily protein | chr5:21661588-21663383 FORWARD LENGTH=304 |
IRGSP | Os06t0231300-01 | 77.8 | 88.3 | 300 | 1e-81 | CS domain domain containing protein. |
nr | gb|ACN25640.1| | 71.3 | 84.2 | 304 | 3e-80 | unknown [Zea mays] |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
DHC_Leaf | CL4186.Contig2_DHC_Leaf | 99.8 | 99.8 | 1939 | 0.0 | size 1076 |
DHA_Leaf | CL4603.Contig1_DHA_Leaf | 100.0 | 100.0 | 1124 | 0.0 | size 1210 |
F1_Leaf | CL1869.Contig2_F1_Leaf | 99.2 | 99.2 | 1875 | 0.0 | size 996 |
A.roylei_Leaf | Unigene25722_A.roylei_Leaf | 98.8 | 98.8 | 1068 | 0.0 | size 1169 |
F1_Bulb | Unigene993_F1_Bulb | 99.8 | 99.8 | 1116 | 0.0 | size 1225 |
A.roylei_Bulb | Unigene28668_A.roylei_Bulb | 98.8 | 98.8 | 1068 | 0.0 | size 1177 |
DHA_Root | CL385.Contig3_DHA_Root | 99.8 | 99.8 | 2173 | 0.0 | size 1194 |
F1_Root | Unigene23377_F1_Root | 100.0 | 100.0 | 1176 | 0.0 | size 596 |
A.roylei_Root | CL4950.Contig2_A.roylei_Root | 98.8 | 98.8 | 1068 | 0.0 | size 1175 |
FFStem | Unigene23324_FFStem | 97.5 | 97.5 | 1007 | 0.0 | size 1211 |
FF_5AStem | Unigene13809_FF_5AStem | 97.7 | 97.7 | 1015 | 0.0 | size 1156 |
GI_kazusaEST | CF436182 | 99.8 | 99.8 | 1124 | 0.0 | similar to UniRef100_A9RZW7 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (14%) |
A.fistulosum_Unigene | AFU_08133 | 97.7 | 97.7 | 1015 | 0.0 |