Length: 1,830 (bp)
RPKM (DHA_bulb): 3.95
Reference | Bulb | Root | Leaf | Stem | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
DHA_Bulb | F1 | A.roylei | DHA | F1 | A.roylei | DHC | DHA | F1 | A.roylei | FF | FF+5A |
3.95 | 4.39 | 3.85 | 3.26 | 2.29 | 2.36 | 11.88 | 2.60 | 3.30 | 1.90 | 1.91 | 1.56 |
chromosome addition lines
FF1A | FF2A | FF3A | FF4A | FF5A | FF6A | FF7A | FF8A | AA | FF | |
---|---|---|---|---|---|---|---|---|---|---|
Bulb | 2.46 | 2.76 | 2.24 | 3.07 | 2.5 | 2.71 | 3.28 | 2.73 | 7.26 | 3.19 |
Root | 2.14 | 3.82 | 2.29 | 3.68 | 2.57 | 2.58 | 3.26 | 2.27 | 4.24 | 3.26 |
Leaf | 1.23 | 1.85 | 1.26 | 3.24 | 2.11 | 1.58 | 1.53 | 1.14 | 4.3 | 1.36 |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
TAIR | AT4G16340.1 | 47.0 | 61.4 | 171 | 2e-42 | | Symbols: SPK1 | guanyl-nucleotide exchange factors;GTPase binding;GTP binding | chr4:9228773-9241060 REVERSE LENGTH=1830 |
IRGSP | Os01t0897300-02 | 58.7 | 78.7 | 94.7 | 2e-19 | Ribonuclease T2 family protein. |
nr | ref|XP_002277136.1| | 60.0 | 66.1 | 209 | 5e-77 | PREDICTED: dedicator of cytokinesis protein 11 [Vitis vinifera] gi|297738489|emb|CBI27734.3| unnamed protein product [Vitis vinifera] |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
DHC_Leaf | CL3918.Contig2_DHC_Leaf | 96.3 | 96.3 | 1078 | 0.0 | size 1596 |
DHA_Leaf | CL6835.Contig3_DHA_Leaf | 99.1 | 99.1 | 3003 | 0.0 | size 1888 |
F1_Leaf | CL3529.Contig1_F1_Leaf | 98.6 | 98.6 | 1675 | 0.0 | size 1312 |
A.roylei_Leaf | CL4523.Contig2_A.roylei_Leaf | 95.1 | 95.1 | 888 | 0.0 | size 668 |
F1_Bulb | Unigene25586_F1_Bulb | 99.7 | 99.7 | 1415 | 0.0 | size 1431 |
A.roylei_Bulb | CL4790.Contig2_A.roylei_Bulb | 98.5 | 98.5 | 1392 | 0.0 | size 772 |
DHA_Root | CL3487.Contig2_DHA_Root | 98.3 | 98.3 | 1520 | 0.0 | size 823 |
F1_Root | Unigene20282_F1_Root | 99.6 | 99.6 | 1070 | 0.0 | size 1044 |
A.roylei_Root | Unigene21225_A.roylei_Root | 98.6 | 98.6 | 1185 | 0.0 | size 638 |
FFStem | Unigene29113_FFStem | 96.5 | 96.5 | 862 | 0.0 | size 1121 |
FF_5AStem | CL4690.Contig2_FF_5AStem | 96.5 | 96.5 | 862 | 0.0 | size 1064 |
GI_kazusaEST | CF435122_e | 99.4 | 99.4 | 916 | 0.0 | |
A.fistulosum_Unigene | AFU_10862 | 97.1 | 97.1 | 827 | 0.0 |