Sequence

CL3.Contig1_DHA_Bulb

Expression profile

RPKM ( Reads Per Kilobase of exon per Million mapped reads )

Reference Bulb Root Leaf Stem
DHA_Bulb F1 A.roylei DHA F1 A.roylei DHC DHA F1 A.roylei FF FF+5A
3.99 2.77 4.79 2.90 3.21 4.55 2.77 3.95 4.08 3.82 2.92 3.62

FF1A FF2A FF3A FF4A FF5A FF6A FF7A FF8A AA FF
Bulb 1.23 0.87 0.74 1.27 1.07 0.8 1.43 1.59 1.91 1.48
Root 0.81 0.76 0.7 0.83 0.75 0.31 0.79 1.22 1.34 0.65
Leaf 0.48 0.44 1.27 0.95 0.39 0.62 0.3 0.72 0.57 0.79

BLAST

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
TAIR --No_Hits--
IRGSP --No_Hits--
nr --No_Hits--


Corresponding unigene

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
DHC_Leaf Unigene17419_DHC_Leaf 100.0 100.0 622 1e-178 size 470
DHA_Leaf Unigene14662_DHA_Leaf 100.0 100.0 589 1e-168 size 299
F1_Leaf Unigene16825_F1_Leaf 100.0 100.0 622 1e-178 size 1433
A.roylei_Leaf Unigene28963_A.roylei_Leaf 97.2 97.2 504 1e-142 size 297
F1_Bulb CL5825.Contig1_F1_Bulb 100.0 100.0 575 1e-164 size 293
A.roylei_Bulb CL3717.Contig1_A.roylei_Bulb 97.2 97.2 504 1e-142 size 562
DHA_Root Unigene15477_DHA_Root 100.0 100.0 620 1e-177 size 345
F1_Root Unigene4185_F1_Root 100.0 100.0 622 1e-178 size 747
A.roylei_Root Unigene59_A.roylei_Root 97.2 97.2 504 1e-142 size 635
FFStem Unigene31144_FFStem 92.4 92.4 434 1e-121 size 1292
FF_5AStem Unigene23291_FF_5AStem 92.4 92.4 434 1e-121 size 751
GI_kazusaEST --No_Hits--
A.fistulosum_Unigene AFU_22421 94.1 94.1 52.0 5e-06


Top