Length: 3,070 (bp)
RPKM (DHA_bulb): 23.29
Reference | Bulb | Root | Leaf | Stem | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
DHA_Bulb | F1 | A.roylei | DHA | F1 | A.roylei | DHC | DHA | F1 | A.roylei | FF | FF+5A |
23.29 | 20.65 | 23.59 | 23.68 | 27.81 | 19.50 | 9.69 | 26.71 | 19.84 | 12.53 | 21.96 | 22.87 |
chromosome addition lines
FF1A | FF2A | FF3A | FF4A | FF5A | FF6A | FF7A | FF8A | AA | FF | |
---|---|---|---|---|---|---|---|---|---|---|
Bulb | 15.84 | 18.6 | 17.65 | 21.83 | 32.75 | 23.02 | 25.15 | 24.41 | 20.9 | 28.83 |
Root | 20.21 | 18.55 | 20.73 | 23.79 | 33.64 | 21.79 | 29.73 | 27.11 | 26.83 | 23.61 |
Leaf | 6.32 | 7.18 | 9.45 | 11.69 | 11.98 | 11.56 | 12.52 | 8.35 | 11.49 | 9.56 |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
TAIR | AT4G03080.1 | 71.4 | 79.7 | 1261 | 0.0 | | Symbols: BSL1 | BRI1 suppressor 1 (BSU1)-like 1 | chr4:1359935-1365166 REVERSE LENGTH=881 |
IRGSP | Os05t0144400-01 | 74.2 | 81.4 | 1292 | 0.0 | Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase domain containing protein. |
nr | ref|XP_002270638.2| | 74.3 | 80.2 | 1292 | 0.0 | PREDICTED: serine/threonine-protein phosphatase BSL1-like [Vitis vinifera] gi|296086652|emb|CBI32287.3| unnamed protein product [Vitis vinifera] |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
DHC_Leaf | Unigene28327_DHC_Leaf | 100.0 | 100.0 | 1758 | 0.0 | size 887 |
DHA_Leaf | Unigene8032_DHA_Leaf | 100.0 | 100.0 | 6086 | 0.0 | size 3114 |
F1_Leaf | Unigene19451_F1_Leaf | 100.0 | 100.0 | 6078 | 0.0 | size 3070 |
A.roylei_Leaf | CL6004.Contig2_A.roylei_Leaf | 99.0 | 99.0 | 3120 | 0.0 | size 1642 |
F1_Bulb | CL4985.Contig2_F1_Bulb | 99.9 | 99.9 | 6046 | 0.0 | size 3075 |
A.roylei_Bulb | CL5131.Contig1_A.roylei_Bulb | 98.3 | 98.3 | 5584 | 0.0 | size 3022 |
DHA_Root | Unigene22444_DHA_Root | 99.9 | 99.9 | 4333 | 0.0 | size 2194 |
F1_Root | Unigene22594_F1_Root | 100.0 | 100.0 | 6084 | 0.0 | size 3069 |
A.roylei_Root | CL7237.Contig2_A.roylei_Root | 99.0 | 99.0 | 3140 | 0.0 | size 1655 |
FFStem | CL3999.Contig2_FFStem | 98.3 | 98.3 | 3092 | 0.0 | size 1675 |
FF_5AStem | CL2880.Contig2_FF_5AStem | 98.0 | 98.0 | 3812 | 0.0 | size 2209 |
GI_kazusaEST | TC6191 | 99.0 | 99.0 | 1818 | 0.0 | similar to UniRef100_A2Y0B6 Cluster: Serine/threonine protein phosphatase; n=1; Oryza sativa Indica Group|Rep: Serine/threonine protein phosphatase - Oryza sativa subsp. indica (Rice), partial (33%) |
A.fistulosum_Unigene | AFU_14103 | 98.8 | 98.8 | 1717 | 0.0 |