Length: 1,255 (bp)
RPKM (DHA_bulb): 12.94
Reference | Bulb | Root | Leaf | Stem | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
DHA_Bulb | F1 | A.roylei | DHA | F1 | A.roylei | DHC | DHA | F1 | A.roylei | FF | FF+5A |
12.94 | 8.99 | 19.49 | 15.24 | 16.10 | 33.49 | 28.05 | 19.83 | 20.49 | 25.59 | 16.47 | 16.41 |
chromosome addition lines
FF1A | FF2A | FF3A | FF4A | FF5A | FF6A | FF7A | FF8A | AA | FF | |
---|---|---|---|---|---|---|---|---|---|---|
Bulb | 18.7 | 14.8 | 12.41 | 10.62 | 12.97 | 10.58 | 9.58 | 7.92 | 16.38 | 13.91 |
Root | 34.27 | 18.78 | 20.87 | 19.72 | 31.6 | 21.43 | 17.92 | 15.88 | 24.57 | 28.82 |
Leaf | 23.43 | 28.77 | 28.47 | 26.63 | 22.32 | 25.02 | 27.23 | 22.78 | 31.24 | 18.41 |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
TAIR | AT2G35680.1 | 52.7 | 67.9 | 317 | 1e-86 | | Symbols: | Phosphotyrosine protein phosphatases superfamily protein | chr2:14997004-14998590 REVERSE LENGTH=337 |
IRGSP | Os10t0561900-03 | 58.4 | 71.6 | 343 | 1e-94 | Similar to Protein-tyrosine phosphatase mitochondrial 1. |
nr | gb|EMJ12396.1| | 60.0 | 75.2 | 347 | 4e-93 | hypothetical protein PRUPE_ppa008400mg [Prunus persica] |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
DHC_Leaf | Unigene26498_DHC_Leaf | 100.0 | 100.0 | 2488 | 0.0 | size 1337 |
DHA_Leaf | CL403.Contig1_DHA_Leaf | 100.0 | 100.0 | 2488 | 0.0 | size 1331 |
F1_Leaf | CL4410.Contig1_F1_Leaf | 100.0 | 100.0 | 2488 | 0.0 | size 1266 |
A.roylei_Leaf | CL4984.Contig1_A.roylei_Leaf | 97.6 | 97.6 | 2303 | 0.0 | size 1392 |
F1_Bulb | CL6432.Contig1_F1_Bulb | 100.0 | 100.0 | 1846 | 0.0 | size 931 |
A.roylei_Bulb | CL4303.Contig1_A.roylei_Bulb | 97.6 | 97.6 | 2303 | 0.0 | size 1376 |
DHA_Root | Unigene33320_DHA_Root | 100.0 | 100.0 | 2488 | 0.0 | size 1283 |
F1_Root | CL4547.Contig1_F1_Root | 100.0 | 100.0 | 2488 | 0.0 | size 1291 |
A.roylei_Root | CL7069.Contig1_A.roylei_Root | 97.6 | 97.6 | 2303 | 0.0 | size 1420 |
FFStem | CL4490.Contig1_FFStem | 94.8 | 94.8 | 2022 | 0.0 | size 1274 |
FF_5AStem | CL6357.Contig1_FF_5AStem | 95.2 | 95.2 | 2052 | 0.0 | size 1325 |
GI_kazusaEST | TC7292 | 99.6 | 99.6 | 2077 | 0.0 | similar to UniRef100_Q7XC53 Cluster: Dual specificity phosphatase, catalytic domain containing protein, expressed; n=3; Oryza sativa|Rep: Dual specificity phosphatase, catalytic domain containing protein, expressed - Oryza sativa subsp. japonica (Rice), partial (54%) |
A.fistulosum_Unigene | AFU_04320 | 95.2 | 95.2 | 2052 | 0.0 |