Sequence

CL15.Contig1_DHA_Bulb

Expression profile

RPKM ( Reads Per Kilobase of exon per Million mapped reads )

Reference Bulb Root Leaf Stem
DHA_Bulb F1 A.roylei DHA F1 A.roylei DHC DHA F1 A.roylei FF FF+5A
11.40 14.12 8.21 1.84 2.35 5.37 0.18 1.81 2.02 1.86 7.96 12.80

Chromosome addition lines
FF1A FF2A FF3A FF4A FF5A FF6A FF7A FF8A AA FF
Bulb 7.1 7.05 7.98 6.89 12.57 5.96 6.56 7.94 6.35 8.16
Root 4.29 6.8 3.8 4.11 6.12 6.1 7.39 5.63 0.4 4.49
Leaf 2.14 0.39 1.56 2.58 1.53 1.15 1.16 1.17 0.61 0.79
DHA_Fusarium
Control TA AC76
average SD average SD average SD
0.11 0.09 0.42 0.27 0.72 0.69

BLAST

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
TAIR --No_Hits--
IRGSP --No_Hits--
nr gb|AGI62062.1| 48.9 60.0 77.0 2e-12 SQUAMOSA promoter-binding-like 14 [Erycina pusilla]

Corresponding unigene

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
DHC_Leaf --No_Hits--
DHA_Leaf --No_Hits--
F1_Leaf Unigene1733_F1_Leaf 100.0 100.0 307 3e-83 size 155
A.roylei_Leaf Unigene9919_A.roylei_Leaf 97.7 97.7 480 1e-135 size 266
F1_Bulb CL2727.Contig2_F1_Bulb 100.0 100.0 850 0.0 size 1228
A.roylei_Bulb Unigene21443_A.roylei_Bulb 98.1 98.1 787 0.0 size 1257
DHA_Root Unigene10637_DHA_Root 100.0 100.0 317 3e-86 size 160
F1_Root Unigene17876_F1_Root 100.0 100.0 680 0.0 size 343
A.roylei_Root CL6644.Contig2_A.roylei_Root 98.1 98.1 563 1e-160 size 890
FFStem CL3278.Contig2_FFStem 98.6 98.6 789 0.0 size 459
FF_5AStem CL7760.Contig2_FF_5AStem 98.5 98.5 759 0.0 size 412
GI_kazusaEST AcFES03G19 100.0 100.0 724 0.0
A.fistulosum_Unigene AFU_08205 98.6 98.6 803 0.0


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