Length: 568 (bp)
RPKM (DHA_bulb): 14.87
Reference | Bulb | Root | Leaf | Stem | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
DHA_Bulb | F1 | A.roylei | DHA | F1 | A.roylei | DHC | DHA | F1 | A.roylei | FF | FF+5A |
14.87 | 8.02 | 7.11 | 7.93 | 15.22 | 11.46 | 6.76 | 8.80 | 6.33 | 6.83 | 6.60 | 5.73 |
chromosome addition lines
FF1A | FF2A | FF3A | FF4A | FF5A | FF6A | FF7A | FF8A | AA | FF | |
---|---|---|---|---|---|---|---|---|---|---|
Bulb | 3.35 | 6.29 | 2.41 | 1.99 | 2.41 | 1.52 | 3.55 | 2.66 | 9.52 | 3.08 |
Root | 4.66 | 7.82 | 4.26 | 4.87 | 3.1 | 2.52 | 5.7 | 6.08 | 13.61 | 3.74 |
Leaf | 3.46 | 5.37 | 3.24 | 3.13 | 2.92 | 2.59 | 2.71 | 4.65 | 13.9 | 3.55 |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
TAIR | AT1G45170.2 | 60.3 | 83.8 | 86.7 | 1e-17 | | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 60 Blast hits to 60 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:17096233-17097910 REVERSE LENGTH=167 |
IRGSP | Os03t0855600-02 | 51.6 | 75.8 | 70.1 | 8e-13 | Similar to DANA2. |
nr | gb|ABF70167.1| | 68.7 | 86.6 | 99.4 | 4e-19 | hypothetical protein MA4_112I10.60 [Musa acuminata] |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
DHC_Leaf | Unigene27275_DHC_Leaf | 100.0 | 100.0 | 589 | 1e-168 | size 332 |
DHA_Leaf | Unigene24992_DHA_Leaf | 100.0 | 100.0 | 589 | 1e-168 | size 965 |
F1_Leaf | Unigene19410_F1_Leaf | 100.0 | 100.0 | 589 | 1e-168 | size 940 |
A.roylei_Leaf | CL1574.Contig1_A.roylei_Leaf | 98.3 | 98.3 | 549 | 1e-156 | size 787 |
F1_Bulb | CL2239.Contig1_F1_Bulb | 100.0 | 100.0 | 589 | 1e-168 | size 940 |
A.roylei_Bulb | CL3583.Contig2_A.roylei_Bulb | 98.5 | 98.5 | 507 | 1e-143 | size 584 |
DHA_Root | CL3235.Contig2_DHA_Root | 100.0 | 100.0 | 589 | 1e-168 | size 936 |
F1_Root | Unigene20000_F1_Root | 100.0 | 100.0 | 589 | 1e-168 | size 1038 |
A.roylei_Root | CL255.Contig2_A.roylei_Root | 98.2 | 98.2 | 517 | 1e-146 | size 809 |
FFStem | CL6739.Contig2_FFStem | 96.6 | 96.6 | 450 | 1e-126 | size 791 |
FF_5AStem | Unigene31810_FF_5AStem | 96.6 | 96.6 | 456 | 1e-128 | size 389 |
GI_kazusaEST | onion_EST_c2348 | 100.0 | 100.0 | 509 | 1e-144 | |
A.fistulosum_Unigene | AFU_14253 | 93.5 | 93.5 | 383 | 1e-105 |