Length: 934 (bp)
RPKM (DHA_bulb): 21.80
Reference | Bulb | Root | Leaf | Stem | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
DHA_Bulb | F1 | A.roylei | DHA | F1 | A.roylei | DHC | DHA | F1 | A.roylei | FF | FF+5A |
21.80 | 11.66 | 5.98 | 12.74 | 20.26 | 14.24 | 9.54 | 14.81 | 10.23 | 8.39 | 7.72 | 6.68 |
chromosome addition lines
FF1A | FF2A | FF3A | FF4A | FF5A | FF6A | FF7A | FF8A | AA | FF | |
---|---|---|---|---|---|---|---|---|---|---|
Bulb | 11.03 | 18.24 | 8.59 | 7.21 | 7.66 | 7.82 | 11.57 | 11.29 | 27.95 | 10.6 |
Root | 8.57 | 17.43 | 7.73 | 8.15 | 5.54 | 4.82 | 11.94 | 11.02 | 26.89 | 7.89 |
Leaf | 11.28 | 20.48 | 12.69 | 10.31 | 12.72 | 9.08 | 9.47 | 18.83 | 44.39 | 11.54 |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
TAIR | AT1G45170.1 | 59.5 | 76.7 | 265 | 3e-71 | | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits to 62 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:17096233-17097910 REVERSE LENGTH=213 |
IRGSP | Os03t0855600-02 | 52.5 | 70.9 | 240 | 1e-63 | Similar to DANA2. |
nr | ref|XP_002510363.1| | 62.3 | 79.1 | 278 | 2e-72 | conserved hypothetical protein [Ricinus communis] gi|223551064|gb|EEF52550.1| conserved hypothetical protein [Ricinus communis] |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
DHC_Leaf | CL661.Contig2_DHC_Leaf | 100.0 | 100.0 | 1852 | 0.0 | size 936 |
DHA_Leaf | Unigene24992_DHA_Leaf | 100.0 | 100.0 | 1852 | 0.0 | size 965 |
F1_Leaf | Unigene19410_F1_Leaf | 100.0 | 100.0 | 1852 | 0.0 | size 940 |
A.roylei_Leaf | CL1574.Contig1_A.roylei_Leaf | 98.3 | 98.3 | 1437 | 0.0 | size 787 |
F1_Bulb | CL2239.Contig1_F1_Bulb | 100.0 | 100.0 | 1852 | 0.0 | size 940 |
A.roylei_Bulb | CL3583.Contig1_A.roylei_Bulb | 98.6 | 98.6 | 1294 | 0.0 | size 693 |
DHA_Root | CL3235.Contig2_DHA_Root | 100.0 | 100.0 | 1852 | 0.0 | size 936 |
F1_Root | Unigene20000_F1_Root | 100.0 | 100.0 | 1852 | 0.0 | size 1038 |
A.roylei_Root | CL255.Contig2_A.roylei_Root | 98.3 | 98.3 | 1493 | 0.0 | size 809 |
FFStem | CL6739.Contig2_FFStem | 97.6 | 97.6 | 1417 | 0.0 | size 791 |
FF_5AStem | Unigene35795_FF_5AStem | 96.8 | 96.8 | 763 | 0.0 | size 443 |
GI_kazusaEST | onion_EST_c2348 | 99.9 | 99.9 | 1580 | 0.0 | |
A.fistulosum_Unigene | AFU_14253 | 96.5 | 96.5 | 1445 | 0.0 |