Length: 171 (bp)
RPKM (DHA_bulb): 6.62
Reference | Bulb | Root | Leaf | Stem | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
DHA_Bulb | F1 | A.roylei | DHA | F1 | A.roylei | DHC | DHA | F1 | A.roylei | FF | FF+5A |
6.62 | 4.40 | 1.85 | 3.00 | 4.54 | 1.62 | 3.47 | 4.76 | 4.11 | 2.34 | 7.07 | 4.82 |
chromosome addition lines
FF1A | FF2A | FF3A | FF4A | FF5A | FF6A | FF7A | FF8A | AA | FF | |
---|---|---|---|---|---|---|---|---|---|---|
Bulb | 7.53 | 5.29 | 5.78 | 9.72 | 11.79 | 5.22 | 7.92 | 8.27 | 11.58 | 8.47 |
Root | 1.32 | 1 | 1.4 | 1.87 | 1.72 | 0.39 | 2.1 | 1.45 | 1.82 | 1.37 |
Leaf | 3.77 | 4.87 | 6.55 | 5.47 | 9.62 | 5.42 | 4.17 | 7.16 | 13.47 | 3.26 |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
TAIR | AT1G45170.1 | 54.5 | 80.0 | 74.7 | 1e-14 | | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits to 62 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:17096233-17097910 REVERSE LENGTH=213 |
IRGSP | --No_Hits-- | |||||
nr | ref|XP_004147789.1| | 60.0 | 87.3 | 82.0 | 5e-14 | PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Cucumis sativus] gi|449476784|ref|XP_004154833.1| PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Cucumis sativus] |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
DHC_Leaf | CL661.Contig3_DHC_Leaf | 100.0 | 100.0 | 339 | 3e-93 | size 931 |
DHA_Leaf | Unigene24993_DHA_Leaf | 100.0 | 100.0 | 339 | 3e-93 | size 911 |
F1_Leaf | Unigene19411_F1_Leaf | 100.0 | 100.0 | 339 | 3e-93 | size 928 |
A.roylei_Leaf | CL1574.Contig1_A.roylei_Leaf | 83.6 | 83.6 | 117 | 2e-26 | size 787 |
F1_Bulb | CL2239.Contig2_F1_Bulb | 100.0 | 100.0 | 339 | 3e-93 | size 782 |
A.roylei_Bulb | CL3583.Contig2_A.roylei_Bulb | 100.0 | 100.0 | 339 | 3e-93 | size 584 |
DHA_Root | Unigene23049_DHA_Root | 100.0 | 100.0 | 339 | 3e-93 | size 171 |
F1_Root | Unigene20001_F1_Root | 100.0 | 100.0 | 339 | 3e-93 | size 939 |
A.roylei_Root | CL255.Contig2_A.roylei_Root | 83.6 | 83.6 | 117 | 2e-26 | size 809 |
FFStem | CL6739.Contig1_FFStem | 98.8 | 98.8 | 323 | 2e-88 | size 936 |
FF_5AStem | CL7182.Contig1_FF_5AStem | 98.8 | 98.8 | 323 | 2e-88 | size 935 |
GI_kazusaEST | onion_EST_c2348 | 84.2 | 84.2 | 125 | 3e-29 | |
A.fistulosum_Unigene | AFU_21179 | 98.8 | 98.8 | 323 | 5e-88 |