Sequence

CL13.Contig2_DHA_Bulb

Expression profile

RPKM ( Reads Per Kilobase of exon per Million mapped reads )

Reference Bulb Root Leaf Stem
DHA_Bulb F1 A.roylei DHA F1 A.roylei DHC DHA F1 A.roylei FF FF+5A
3.57 1.91 0.48 1.90 1.40 1.75 0.32 7.47 2.99 0.00 0.00 0.00

Chromosome addition lines
FF1A FF2A FF3A FF4A FF5A FF6A FF7A FF8A AA FF
Bulb 0 0 2.38 0 0 0 0 0 3.51 0
Root 0.01 0 1.12 0 0 0 0 0 1.42 0
Leaf 0 0.1 0.4 0.1 0 0 0 0 0.47 0
DHA_Fusarium
Control TA AC76
average SD average SD average SD
3.03 1.50 2.58 1.78 2.23 0.73

BLAST

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
TAIR --No_Hits--
IRGSP --No_Hits--
nr emb|CAN67819.1| 47.8 72.5 77.8 9e-13 hypothetical protein VITISV_041315 [Vitis vinifera]

Corresponding unigene

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
DHC_Leaf Unigene22002_DHC_Leaf 89.0 89.0 272 8e-73 size 610
DHA_Leaf CL6814.Contig1_DHA_Leaf 100.0 100.0 494 1e-139 size 1270
F1_Leaf CL748.Contig5_F1_Leaf 91.1 91.1 317 2e-86 size 1061
A.roylei_Leaf Unigene29473_A.roylei_Leaf 84.5 84.5 157 3e-38 size 463
F1_Bulb CL2252.Contig1_F1_Bulb 91.1 91.1 317 2e-86 size 375
A.roylei_Bulb --No_Hits--
DHA_Root CL1861.Contig1_DHA_Root 91.1 91.1 317 2e-86 size 938
F1_Root CL5065.Contig1_F1_Root 91.1 91.1 317 2e-86 size 1203
A.roylei_Root CL6294.Contig1_A.roylei_Root 98.3 98.3 325 7e-89 size 176
FFStem --No_Hits--
FF_5AStem --No_Hits--
GI_kazusaEST --No_Hits--
A.fistulosum_Unigene AFU_13918 83.7 83.7 60.0 2e-08


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