Sequence

CL12.Contig2_DHA_Bulb

Expression profile

RPKM ( Reads Per Kilobase of exon per Million mapped reads )

Reference Bulb Root Leaf Stem
DHA_Bulb F1 A.roylei DHA F1 A.roylei DHC DHA F1 A.roylei FF FF+5A
1.72 0.63 0.00 0.00 0.41 0.00 0.42 0.62 0.44 0.00 0.00 0.00

Chromosome addition lines
FF1A FF2A FF3A FF4A FF5A FF6A FF7A FF8A AA FF
Bulb 0 0.13 0.86 0.14 0.26 0.28 0 0 0.54 0
Root 0.01 0 0.15 0 0.02 0 0 0 0.3 0
Leaf 0 0 0.4 0 0 0.14 0 0 0 0
DHA_Fusarium
Control TA AC76
average SD average SD average SD
0.40 0.30 0.24 0.00 0.56 0.06

BLAST

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
TAIR --No_Hits--
IRGSP --No_Hits--
nr --No_Hits--

Corresponding unigene

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
DHC_Leaf CL1046.Contig1_DHC_Leaf 86.0 86.0 149 6e-36 size 847
DHA_Leaf Unigene29271_DHA_Leaf 87.0 87.0 161 2e-39 size 500
F1_Leaf CL2912.Contig1_F1_Leaf 86.0 86.0 149 7e-36 size 631
A.roylei_Leaf Unigene453_A.roylei_Leaf 85.7 85.7 155 9e-38 size 319
F1_Bulb Unigene12_F1_Bulb 80.7 80.7 77.8 2e-14 size 834
A.roylei_Bulb CL419.Contig3_A.roylei_Bulb 85.1 85.1 139 7e-33 size 3176
DHA_Root CL7267.Contig1_DHA_Root 95.8 95.8 119 6e-27 size 399
F1_Root CL712.Contig3_F1_Root 84.0 84.0 121 2e-27 size 276
A.roylei_Root CL193.Contig1_A.roylei_Root 84.6 84.6 143 4e-34 size 1157
FFStem CL7391.Contig1_FFStem 81.6 81.6 71.9 1e-12 size 254
FF_5AStem --No_Hits--
GI_kazusaEST --No_Hits--
A.fistulosum_Unigene AFU_11704 81.7 81.7 93.7 9e-19


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