Sequence

CL12.Contig1_DHA_Bulb

Expression profile

RPKM ( Reads Per Kilobase of exon per Million mapped reads )

Reference Bulb Root Leaf Stem
DHA_Bulb F1 A.roylei DHA F1 A.roylei DHC DHA F1 A.roylei FF FF+5A
3.00 2.74 0.20 3.33 2.69 0.79 2.94 4.80 3.68 0.00 0.00 0.19

Chromosome addition lines
FF1A FF2A FF3A FF4A FF5A FF6A FF7A FF8A AA FF
Bulb 0.24 0 0 0 0.26 0.44 0.26 0 1.72 0
Root 0.04 0.44 0.16 0.07 0.16 0.5 0.11 0 4.77 0
Leaf 0 0 0.13 0.12 0 0.47 0 0 0.14 0
DHA_Fusarium
Control TA AC76
average SD average SD average SD
3.59 1.65 2.25 0.32 2.31 0.82

BLAST

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
TAIR --No_Hits--
IRGSP --No_Hits--
nr --No_Hits--

Corresponding unigene

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
DHC_Leaf CL1046.Contig1_DHC_Leaf 91.1 91.1 258 1e-68 size 847
DHA_Leaf CL691.Contig1_DHA_Leaf 97.0 97.0 353 3e-97 size 929
F1_Leaf CL2912.Contig1_F1_Leaf 91.1 91.1 258 1e-68 size 631
A.roylei_Leaf Unigene724_A.roylei_Leaf 86.1 86.1 178 7e-45 size 1002
F1_Bulb Unigene12_F1_Bulb 97.5 97.5 361 1e-99 size 834
A.roylei_Bulb Unigene25954_A.roylei_Bulb 87.8 87.8 184 1e-46 size 262
DHA_Root CL1148.Contig3_DHA_Root 93.5 93.5 224 2e-58 size 439
F1_Root Unigene13806_F1_Root 97.1 97.1 301 8e-82 size 172
A.roylei_Root Unigene271_A.roylei_Root 88.1 88.1 184 1e-46 size 802
FFStem CL7391.Contig1_FFStem 85.6 85.6 111 2e-24 size 254
FF_5AStem CL1621.Contig2_FF_5AStem 83.0 83.0 97.6 2e-20 size 172
GI_kazusaEST --No_Hits--
A.fistulosum_Unigene AFU_06892 82.8 82.8 123 1e-27


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