Length: 2,252 (bp)
RPKM (DHA_bulb): 19.29
Reference | Bulb | Root | Leaf | Stem | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
DHA_Bulb | F1 | A.roylei | DHA | F1 | A.roylei | DHC | DHA | F1 | A.roylei | FF | FF+5A |
19.29 | 26.05 | 19.70 | 8.76 | 12.48 | 23.18 | 4.38 | 7.57 | 3.62 | 1.74 | 23.74 | 14.63 |
chromosome addition lines
FF1A | FF2A | FF3A | FF4A | FF5A | FF6A | FF7A | FF8A | AA | FF | |
---|---|---|---|---|---|---|---|---|---|---|
Bulb | 18.55 | 19.02 | 18.33 | 19.48 | 22.67 | 23.08 | 20.31 | 19.99 | 24.01 | 20.82 |
Root | 19.07 | 18.88 | 13.14 | 14 | 22.11 | 16.23 | 17.34 | 15.79 | 10.32 | 19.79 |
Leaf | 3.89 | 3.2 | 3.23 | 4.92 | 2.33 | 4.17 | 4.06 | 2.99 | 3.47 | 3.23 |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
TAIR | AT3G51950.2 | 38.8 | 49.1 | 297 | 2e-80 | | Symbols: | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | chr3:19278244-19280407 REVERSE LENGTH=540 |
IRGSP | Os07t0682400-03 | 41.7 | 50.9 | 423 | 1e-118 | Nucleotide-binding, alpha-beta plait domain containing protein. |
nr | emb|CBI28616.3| | 46.2 | 56.5 | 448 | 1e-123 | unnamed protein product [Vitis vinifera] |
DB | AC | Iden (%) |
Posi (%) |
Score | Evalue | Annotation |
---|---|---|---|---|---|---|
DHC_Leaf | CL5601.Contig3_DHC_Leaf | 99.4 | 99.4 | 2409 | 0.0 | size 2082 |
DHA_Leaf | CL428.Contig3_DHA_Leaf | 99.8 | 99.8 | 2464 | 0.0 | size 2239 |
F1_Leaf | Unigene25371_F1_Leaf | 99.9 | 99.9 | 1558 | 0.0 | size 844 |
A.roylei_Leaf | CL3089.Contig1_A.roylei_Leaf | 99.0 | 99.0 | 1320 | 0.0 | size 761 |
F1_Bulb | CL295.Contig1_F1_Bulb | 99.6 | 99.6 | 2000 | 0.0 | size 1060 |
A.roylei_Bulb | CL4556.Contig1_A.roylei_Bulb | 98.7 | 98.7 | 1873 | 0.0 | size 1001 |
DHA_Root | Unigene26300_DHA_Root | 99.9 | 99.9 | 1937 | 0.0 | size 1030 |
F1_Root | CL1793.Contig6_F1_Root | 99.8 | 99.8 | 2464 | 0.0 | size 2157 |
A.roylei_Root | CL1282.Contig2_A.roylei_Root | 98.6 | 98.6 | 2345 | 0.0 | size 2279 |
FFStem | Unigene26257_FFStem | 98.3 | 98.3 | 1852 | 0.0 | size 1010 |
FF_5AStem | Unigene13828_FF_5AStem | 98.5 | 98.5 | 1859 | 0.0 | size 1002 |
GI_kazusaEST | ES449306_e | 99.5 | 99.5 | 1465 | 0.0 | |
A.fistulosum_Unigene | AFU_01013 | 98.0 | 98.0 | 2226 | 0.0 |