Sequence

CL8.Contig4_DHA_Bulb

Expression profile

RPKM ( Reads Per Kilobase of exon per Million mapped reads )

Reference Bulb Root Leaf Stem
DHA_Bulb F1 A.roylei DHA F1 A.roylei DHC DHA F1 A.roylei FF FF+5A
3.29 3.22 1.15 0.92 1.58 1.15 3.91 2.03 1.92 0.23 0.73 0.68

Chromosome addition lines
FF1A FF2A FF3A FF4A FF5A FF6A FF7A FF8A AA FF
Bulb 4.08 5.42 5.89 4.65 4.14 7.34 7.2 7.78 3.19 5.72
Root 2.07 2.01 2.61 2.86 2.95 1.71 2.04 1.91 0.94 2.26
Leaf 2.77 1.92 3.94 3.46 1.87 3.15 2.76 3.49 2.37 3.25
DHA_Fusarium
Control TA AC76
average SD average SD average SD
2.81 0.45 3.25 0.64 3.28 0.44

BLAST

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
TAIR --No_Hits--
IRGSP --No_Hits--
nr --No_Hits--

Corresponding unigene

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
DHC_Leaf CL4666.Contig1_DHC_Leaf 100.0 100.0 270 2e-72 size 204
DHA_Leaf --No_Hits--
F1_Leaf CL5258.Contig2_F1_Leaf 86.2 86.2 131 1e-30 size 340
A.roylei_Leaf --No_Hits--
F1_Bulb CL3596.Contig1_F1_Bulb 100.0 100.0 341 8e-94 size 306
A.roylei_Bulb CL7914.Contig8_A.roylei_Bulb 92.2 92.2 168 7e-42 size 322
DHA_Root CL5136.Contig1_DHA_Root 100.0 100.0 262 6e-70 size 324
F1_Root CL2060.Contig1_F1_Root 100.0 100.0 85.7 8e-17 size 218
A.roylei_Root Unigene9212_A.roylei_Root 90.4 90.4 89.7 5e-18 size 285
FFStem Unigene14246_FFStem 100.0 100.0 79.8 5e-15 size 213
FF_5AStem Unigene12063_FF_5AStem 90.8 90.8 135 9e-32 size 272
GI_kazusaEST --No_Hits--
A.fistulosum_Unigene AFU_98103 97.1 97.1 301 2e-81


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