Sequence

CL3.Contig2_DHA_Bulb

Expression profile

RPKM ( Reads Per Kilobase of exon per Million mapped reads )

Reference Bulb Root Leaf Stem
DHA_Bulb F1 A.roylei DHA F1 A.roylei DHC DHA F1 A.roylei FF FF+5A
2.32 2.41 1.56 1.98 3.47 2.70 1.99 1.53 1.78 1.29 3.29 3.65

Chromosome addition lines
FF1A FF2A FF3A FF4A FF5A FF6A FF7A FF8A AA FF
Bulb 1.72 0.67 1.64 1.55 1.15 0.91 1.06 2.32 0.67 0.86
Root 0.81 0.81 1.36 0.91 0.72 0.72 1.24 1.49 1.31 0.96
Leaf 0.63 0.43 0.96 0.45 0.09 0.62 0.48 1.04 0.42 0.11
DHA_Fusarium
Control TA AC76
average SD average SD average SD
5.15 0.27 5.89 1.00 6.48 0.94

BLAST

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
TAIR --No_Hits--
IRGSP --No_Hits--
nr --No_Hits--

Corresponding unigene

DB AC Iden
(%)
Posi
(%)
Score Evalue Annotation
DHC_Leaf Unigene17419_DHC_Leaf 100.0 100.0 486 1e-137 size 470
DHA_Leaf Unigene14662_DHA_Leaf 100.0 100.0 452 1e-127 size 299
F1_Leaf Unigene16825_F1_Leaf 100.0 100.0 486 1e-137 size 1433
A.roylei_Leaf Unigene28963_A.roylei_Leaf 96.8 96.8 375 1e-104 size 297
F1_Bulb CL5825.Contig2_F1_Bulb 100.0 100.0 505 1e-143 size 255
A.roylei_Bulb CL3717.Contig2_A.roylei_Bulb 96.8 96.8 375 1e-103 size 531
DHA_Root Unigene15477_DHA_Root 100.0 100.0 486 1e-137 size 345
F1_Root Unigene4185_F1_Root 100.0 100.0 486 1e-137 size 747
A.roylei_Root Unigene59_A.roylei_Root 96.8 96.8 375 1e-103 size 635
FFStem Unigene31144_FFStem 96.8 96.8 426 1e-119 size 1292
FF_5AStem Unigene23291_FF_5AStem 96.8 96.8 426 1e-119 size 751
GI_kazusaEST --No_Hits--
A.fistulosum_Unigene AFU_22421 94.1 94.1 52.0 4e-06


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